Index

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__init__() (ArticleOrganizer method) (AutoSearch method) (AutoSurvey method) (Paper method) (Storage method) (SurveyPrompt method)

A

add_info_to_a_paper() (Storage method) add_papers_by_name() (Storage method) add_papers_by_path() (Storage method) approach (AutoSurvey attribute) ArticleOrganizer (class in auto_research.search.post_processing) auto_destination (AutoSearch attribute) auto_load_save() (Storage class method) auto_research module auto_research.applications module auto_research.applications.surveys module auto_research.reimplementation module auto_research.reimplementation.code_availability_check module auto_research.search module auto_research.search.core module auto_research.search.data_retrival module auto_research.search.files_management module

auto_research.search.information module auto_research.search.keywords module auto_research.search.post_processing module auto_research.survey module auto_research.survey.core module auto_research.survey.paper_reader module auto_research.survey.prompts module auto_research.utils module auto_research.utils.files module auto_research.utils.stored_info module auto_research.version module AutoSearch (class in auto_research.search.core) AutoSurvey (class in auto_research.survey.core)

B

base_prompt_formatted() (in module auto_research.reimplementation.code_availability_check)

base_prompt_list() (in module auto_research.search.keywords)

C

calculate_token_length() (Paper method) check_info() (Storage method)

conversation_prompting() (SurveyPrompt method) cost_accumulation (AutoSurvey attribute)

D

date_cutoff (AutoSearch attribute) delay (AutoSearch attribute) destination_folder (AutoSearch attribute)

display_and_download() (AutoSearch method) download_pdf() (in module auto_research.search.data_retrival) draw() (ArticleOrganizer method)

E

ending_pages (AutoSurvey attribute) explain_algorithm() (AutoSurvey method) (SurveyPrompt method) explain_computer_science() (AutoSurvey method) explain_default_computer_science() (SurveyPrompt method) extract_abstract() (AutoSurvey method) (SurveyPrompt method) extract_algorithm() (AutoSurvey method) (SurveyPrompt method) extract_conclusion() (AutoSurvey method) (SurveyPrompt method)

extract_discussion() (AutoSurvey method) (SurveyPrompt method) extract_ending_pages() (Paper method) extract_exact_date() (in module auto_research.search.information) extract_introduction() (AutoSurvey method) (SurveyPrompt method) extract_up_to_first_match_exclude_list() (Paper static method) extracted_information (Paper attribute) extraction() (AutoSurvey method) extraction_key_information() (AutoSurvey method)

F

findings() (AutoSurvey method)

first_n_pages() (Paper method) formatted_to_string_OpenAI() (SurveyPrompt static method)

G

general_interactive_prompting() (SurveyPrompt method) general_text_cleaning (SurveyPrompt attribute), [1] get_all_pdf_files() (in module auto_research.utils.files) get_arxiv_paper_details() (in module auto_research.search.data_retrival)

get_info() (Storage method) get_latest_trial() (Storage static method) get_paper_details_from_semantic_scholar() (in module auto_research.search.data_retrival) get_whole_paper() (Paper method)

I

information (Storage attribute) information_retrieval() (AutoSurvey method) (SurveyPrompt method)

is_pdf_uncorrupted() (in module auto_research.search.files_management) is_valid_url() (in module auto_research.reimplementation.code_availability_check) iterative_prompting() (SurveyPrompt method)

K

keywords (AutoSearch attribute)

L

list_to_formatted_OpenAI() (SurveyPrompt static method)

load_info() (Storage method)

M

mode (AutoSurvey attribute) model (Paper attribute) module auto_research auto_research.applications auto_research.applications.surveys auto_research.reimplementation auto_research.reimplementation.code_availability_check auto_research.search auto_research.search.core auto_research.search.data_retrival auto_research.search.files_management auto_research.search.information auto_research.search.keywords auto_research.search.post_processing auto_research.survey auto_research.survey.core auto_research.survey.paper_reader auto_research.survey.prompts auto_research.utils auto_research.utils.files auto_research.utils.stored_info auto_research.version

N

num_results (AutoSearch attribute)

O

OpenAI_instance (AutoSurvey attribute) order_by_score (ArticleOrganizer attribute)

organize_and_visualize() (ArticleOrganizer method) organize_files (ArticleOrganizer attribute) output (AutoSurvey attribute)

P

Paper (class in auto_research.survey.paper_reader) paper_instance (AutoSurvey attribute) paper_length (Paper attribute) paper_name (AutoSurvey attribute) paper_path (AutoSurvey attribute) (Paper attribute)

perform_a_search() (AutoSearch method) plotting (ArticleOrganizer attribute) print_prompt() (SurveyPrompt method) print_summaries() (in module auto_research.utils.files) prompt_instance (AutoSurvey attribute)

R

rank_threshold (ArticleOrganizer attribute) read_meta_data() (in module auto_research.search.information) read_pymupdf() (Paper method) read_pypdf2() (Paper method)

recency_weight (AutoSearch attribute) review() (AutoSurvey method) run() (AutoSearch method) (AutoSurvey method)

S

sanitize_filename() (in module auto_research.search.files_management) save_info() (Storage method) save_meta_data() (in module auto_research.search.information) score_threshold (ArticleOrganizer attribute) (AutoSearch attribute) search_papers_by_keyword() (AutoSearch method) select_pdf_file() (in module auto_research.utils.files) send_inquiry() (AutoSurvey method)

sequence_assembler_default() (SurveyPrompt static method) sort_by (AutoSearch attribute) source_folder (ArticleOrganizer attribute) Storage (class in auto_research.utils.stored_info) storage_instance (AutoSurvey attribute) suggest_keywords() (in module auto_research.search.keywords) summarize_computer_science() (AutoSurvey method) summarize_default_computer_science() (SurveyPrompt method) SurveyPrompt (class in auto_research.survey.prompts)

T

target_folder (ArticleOrganizer attribute) test_as_list() (in module auto_research.search.keywords)

test_github_link() (in module auto_research.reimplementation.code_availability_check) threshold_type (ArticleOrganizer attribute) topic_to_survey() (in module auto_research.applications.surveys)

W

whole_paper (Paper attribute)

Z

zip_folder (ArticleOrganizer attribute) (AutoSearch attribute)